Difference between revisions of "User:Dmitry Katsubo"
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=== Contact information === | === Contact information === | ||
| − | '''Mobile phone:''' +31 | + | '''Mobile phone:''' +31 651 96-30-34 |
'''E-mail:''' [mailto:dmitry.katsubo@nbic.nl dmitry.katsubo(at)nbic.nl] | '''E-mail:''' [mailto:dmitry.katsubo@nbic.nl dmitry.katsubo(at)nbic.nl] | ||
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'''Education organization and faculty:''' Faculty of [http://www.fpmi.bsu.by/ Applied Mathematics and Informatics] of [[wikipedia:Belarusian State University|Belarusian State University]] | '''Education organization and faculty:''' Faculty of [http://www.fpmi.bsu.by/ Applied Mathematics and Informatics] of [[wikipedia:Belarusian State University|Belarusian State University]] | ||
| − | '''Education Degree:''' Master of Science, diploma title: ''"Using openMosix clustering system for the distributed computations"'' | + | '''Education Degree:''' Master of Science, diploma title: ''"Using [http://openmosix.sourceforge.net/ openMosix] clustering system for the distributed computations"'' |
'''IT Profile & Technologies:''' Java (J2EE, WebServices, ORM, Spring), Perl, C++; SOAP/REST, XSLT/XPath, XML/RDF, SQL, SPARQL, SemanticWeb | '''IT Profile & Technologies:''' Java (J2EE, WebServices, ORM, Spring), Perl, C++; SOAP/REST, XSLT/XPath, XML/RDF, SQL, SPARQL, SemanticWeb | ||
Revision as of 12:23, 14 April 2010
Contents
Information about Dmitry Katsubo
Contact information
Mobile phone: +31 651 96-30-34
E-mail: dmitry.katsubo(at)nbic.nl
ICQ: 30384955
Other Profiles: LinkedIn, MyExperiment
Skype: dmitry.katsubo
Personal information
Birth place and date: Republic of Belarus, Gomel, 4th of September, 1980
Family status: single
Years of work experience in IT: 8
Education organization and faculty: Faculty of Applied Mathematics and Informatics of Belarusian State University
Education Degree: Master of Science, diploma title: "Using openMosix clustering system for the distributed computations"
IT Profile & Technologies: Java (J2EE, WebServices, ORM, Spring), Perl, C++; SOAP/REST, XSLT/XPath, XML/RDF, SQL, SPARQL, SemanticWeb
Current Occupation
Two my major directions are:
- Scientific programmer at NBIC. A member of BioAssist Engineering Team. A coordinator of proteomics platform.
- A part of BioSemantics group, department of medical informatics (located at Erasmus Medical Centre).
Projects
Storage Service for EU-ADR project This webservice runs on top of an triple store and provides a number of pre-cooked queries to the store. The triple store has been filled by mining texts from PubMed, Drugbank, DailyMed for the relations. Also this is a complete web service to get all targets (genes, proteins, enzymes, etc.) that are related to a drug-event pair. Source databases are: Meyler’s Side Effects of Drugs, Martindale, DRUGDEX, SPCs, and Physician Desk Reference.
Peregrine: The main goal of this project is to parse the input text and search for predefined terms. The term may refer one or several concepts and Peregrine tries to disambiguate them. On the last stage Peregrine builds the semantic relations based on position in the sentence.
