User contributions
- 23:50, 11 August 2012 (diff | hist) . . (-83) . . m Sesame (corrected the link) (current)
- 13:23, 14 April 2010 (diff | hist) . . (+36) . . User:Dmitry Katsubo
- 13:19, 14 April 2010 (diff | hist) . . (+73) . . User:Dmitry Katsubo
- 21:40, 28 March 2010 (diff | hist) . . (+383) . . Peregrine Development (added code formatting rules)
- 21:39, 28 March 2010 (diff | hist) . . (+38) . . N File:Peregrine Eclipse Code Formatting.xml (The code formatting rules for Eclipse.) (current)
- 15:43, 26 March 2010 (diff | hist) . . (+493) . . m Peregrine Usage (updated the example up to 0.4-pre)
- 17:47, 24 March 2010 (diff | hist) . . (+656) . . Peregrine Usage
- 16:53, 24 March 2010 (diff | hist) . . (+3) . . m March 2010 Hackathon
- 16:52, 24 March 2010 (diff | hist) . . (+162) . . m March 2010 Hackathon
- 16:50, 24 March 2010 (diff | hist) . . (+22) . . m Agenda Scientific Programmers Meeting 2009/11/13
- 16:49, 24 March 2010 (diff | hist) . . (+5) . . m Peregrine Development
- 01:09, 24 March 2010 (diff | hist) . . (+34) . . m Proteomics hardware
- 16:38, 23 March 2010 (diff | hist) . . (+613) . . Peregrine Releases
- 12:49, 23 March 2010 (diff | hist) . . (0) . . File:NBIC IBM workflow.png (uploaded a new version of "Image:NBIC IBM workflow.png") (current)
- 02:32, 20 March 2010 (diff | hist) . . (+3,005) . . m Peregrine Usage (added sample program)
- 01:00, 20 March 2010 (diff | hist) . . (0) . . File:Peregrine Application Layers.png (uploaded a new version of "Image:Peregrine Application Layers.png") (current)
- 19:27, 19 March 2010 (diff | hist) . . (+1,401) . . Proteomics:Programmers Meeting on 2010-03-19 (added meeting notes)
- 19:21, 19 March 2010 (diff | hist) . . (+108) . . N File:Programmers Meeting MOLGENIS George.pdf (The presentation by George Byelas "A MOLGENIS-based computational platform for proteomics".) (current)
- 16:06, 18 March 2010 (diff | hist) . . (-29) . . m Proteomics:Programmers Meeting on 2010-03-19
- 01:11, 18 March 2010 (diff | hist) . . (+13) . . m Agenda BioAssist Programmers Meeting 2010/03/19
- 01:10, 18 March 2010 (diff | hist) . . (+558) . . Nm Proteomics:Programmers Meeting on 2010-03-19 (New page: == Location and time == * Location: Hojel City Center, gebouw D (5th floor), Graadt van Roggenweg 340, 3531 AH Utrecht * Time: 9:00-10:30 == Attendees == * [[User:Dmitry Katsubo|Dmitry...)
- 17:43, 17 March 2010 (diff | hist) . . (+124) . . m Peregrine Architecture Specification (added memory info)
- 16:53, 17 March 2010 (diff | hist) . . (+86) . . m Peregrine Architecture Specification (added Peregrine Application Layers)
- 16:49, 17 March 2010 (diff | hist) . . (+48) . . N File:Peregrine Application Layers.png (The source is [http://create.ly/g6w8bljy1 here].)
- 16:29, 17 March 2010 (diff | hist) . . (+566) . . m Peregrine Usage (added subprojects information)
- 17:32, 11 March 2010 (diff | hist) . . (+7) . . m Proteomics:Gaining Momentum Meeting on 2010-03-05
- 15:08, 11 March 2010 (diff | hist) . . (+709) . . Peregrine Usage (added memory profiling information)
- 11:09, 11 March 2010 (diff | hist) . . (+68) . . m User:Dmitry Katsubo
- 13:21, 10 March 2010 (diff | hist) . . (+8) . . m Proteomics:Gaining Momentum Meeting on 2010-03-05
- 00:48, 10 March 2010 (diff | hist) . . (+2) . . Proteomics hardware
- 12:12, 9 March 2010 (diff | hist) . . (+82) . . m Proteomics software frameworks
- 12:10, 9 March 2010 (diff | hist) . . (0) . . m Proteomics software frameworks
- 23:35, 8 March 2010 (diff | hist) . . (+80) . . m Proteomics software frameworks
- 23:33, 8 March 2010 (diff | hist) . . (+94) . . m Proteomics data formats (current)
- 23:31, 8 March 2010 (diff | hist) . . (+53) . . Nm APML (Redirecting to Proteomics data formats#Peak list level) (current)
- 23:28, 8 March 2010 (diff | hist) . . (+76) . . m Peregrine Architecture Specification
- 23:24, 8 March 2010 (diff | hist) . . (+99) . . m Peregrine Usage (added sample dependency graph)
- 23:20, 8 March 2010 (diff | hist) . . (+175) . . N File:Peregrine client dependency graph.png (This displays the dependency tree for [http://ws1.grid.sara.nl:21501/artifactory/libs-releases/org/erasmusmc/data-mining/peregrine/peregrine-client/ peregrine-client] project.) (current)
- 23:14, 8 March 2010 (diff | hist) . . (+4) . . m Proteomics pipelines
- 23:13, 8 March 2010 (diff | hist) . . (+43) . . m Proteomics:Gaining Momentum Meeting on 2010-01-15
- 23:09, 8 March 2010 (diff | hist) . . (+8) . . m Proteomics:Programmers Meeting on 2010-02-24
- 23:08, 8 March 2010 (diff | hist) . . (+200) . . m Proteomics:Data Format Meeting on 2010-02-19 (added links)
- 22:58, 8 March 2010 (diff | hist) . . (+142) . . m Proteomics software frameworks
- 22:58, 8 March 2010 (diff | hist) . . (+44) . . Nm TIQAM (Redirecting to Proteomics software frameworks) (current)
- 22:57, 8 March 2010 (diff | hist) . . (+44) . . Nm Corra (Redirecting to Proteomics software frameworks) (current)
- 22:48, 8 March 2010 (diff | hist) . . (+173) . . m Proteomics:Gaining Momentum Meeting on 2010-03-05
- 19:25, 8 March 2010 (diff | hist) . . (+154) . . m Proteomics pipelines (added DAF wokflow)
- 18:26, 8 March 2010 (diff | hist) . . (+56) . . m Proteomics data formats (added format diagram)
- 18:24, 8 March 2010 (diff | hist) . . (+12) . . File:PeakList format and software.png (current)
- 18:22, 8 March 2010 (diff | hist) . . (+68) . . N File:PeakList format and software.png (The image generated from Image:PeakList_format_and_software.mm.)
- 18:21, 8 March 2010 (diff | hist) . . (+77) . . N File:PeakList format and software.mm (The source file, created by [http://freemind.sourceforge.net/wiki/ Freemind].) (current)
- 16:29, 6 March 2010 (diff | hist) . . (+480) . . m Proteomics pipelines
- 15:32, 6 March 2010 (diff | hist) . . (+57) . . m Proteomics:Gaining Momentum Meeting on 2010-03-05
- 19:05, 5 March 2010 (diff | hist) . . (+111) . . m Peregrine
- 14:40, 5 March 2010 (diff | hist) . . (+37) . . m Proteomics:Gaining Momentum Meeting on 2010-03-05
- 14:31, 5 March 2010 (diff | hist) . . (+89) . . m Proteomics:Gaining Momentum Meeting on 2010-03-05
- 14:00, 5 March 2010 (diff | hist) . . (+987) . . m Proteomics:Gaining Momentum Meeting on 2010-03-05
- 12:52, 5 March 2010 (diff | hist) . . (+772) . . m Proteomics:Gaining Momentum Meeting on 2010-03-05
- 12:38, 5 March 2010 (diff | hist) . . (+59) . . m Proteomics:Gaining Momentum Meeting on 2010-01-15
- 01:33, 5 March 2010 (diff | hist) . . (+1,498) . . N Proteomics:Gaining Momentum Meeting on 2010-03-05 (New page: == Location == Biomolecular Mass Spectrometry and Proteomics Group, [http://maps.google.com/maps?f=q&source=s_q&hl=ru&geocode=&q=Padualaan+8,+3584CA+Utrecht,+NL&sll=52.085427,5.168488&ssp...)
- 23:58, 4 March 2010 (diff | hist) . . (+168) . . ErasmusMC ontology file format
- 23:56, 4 March 2010 (diff | hist) . . (+45) . . N File:Psf2ontology.jar (Peregrine PSF to Ontology file converter.) (current)
- 22:18, 1 March 2010 (diff | hist) . . (+27) . . m March 2010 Hackathon
- 17:13, 28 February 2010 (diff | hist) . . (+14) . . m Peregrine Releases
- 13:36, 28 February 2010 (diff | hist) . . (+230) . . m Proteomics:Programmers Meeting on 2010-02-24
- 13:25, 28 February 2010 (diff | hist) . . (+66) . . N MzIdentML (Redirecting to Proteomics data formats#Peptide identification level) (current)
- 13:25, 28 February 2010 (diff | hist) . . (+66) . . N PeakML (Redirecting to Proteomics data formats#Peptide identification level) (current)
- 13:22, 28 February 2010 (diff | hist) . . (+60) . . N Mascot (Redirecting to Software for peptide identification#Commercial) (current)
- 13:22, 28 February 2010 (diff | hist) . . (+5) . . m Software for peptide identification
- 02:54, 28 February 2010 (diff | hist) . . (+1,446) . . m Proteomics:Programmers Meeting on 2010-02-24
- 23:20, 27 February 2010 (diff | hist) . . (-1) . . m Expecter
- 23:15, 27 February 2010 (diff | hist) . . (+16) . . m Proteomics data formats
- 23:14, 27 February 2010 (diff | hist) . . (+4) . . m Software for proteomics search results processing
- 21:18, 27 February 2010 (diff | hist) . . (+65) . . m Proteomics:SARA Meeting on 2010-02-23
- 19:14, 27 February 2010 (diff | hist) . . (+89) . . m Proteomics:Data exchange format (attached images)
- 19:13, 27 February 2010 (diff | hist) . . (+107) . . Proteomics pipelines
- 18:54, 27 February 2010 (diff | hist) . . (+62) . . File:NBIC IBM workflow.png
- 18:53, 27 February 2010 (diff | hist) . . (0) . . N File:NBIC IBM workflow.png
- 18:52, 27 February 2010 (diff | hist) . . (+58) . . m File:Corra workflow.png (current)
- 18:51, 27 February 2010 (diff | hist) . . (0) . . N File:Corra workflow.png
- 18:28, 27 February 2010 (diff | hist) . . (+2,919) . . N Proteomics:SARA Meeting on 2010-02-23 (New page: == Location and time == * Location: [http://maps.google.nl/maps?f=d&source=s_d&saddr=52.352708,4.948547&daddr=Kruislaan&hl=nl&geocode=%3BFaLkHgMdNKNLAA&mra=dme&mrcr=0&mrsp=0&sz=17&dirflg=...)
- 18:23, 27 February 2010 (diff | hist) . . (+90) . . m Proteomics:Programmers Meeting on 2010-01-26
- 01:10, 27 February 2010 (diff | hist) . . (+186) . . m Peregrine Development
- 15:39, 26 February 2010 (diff | hist) . . (+47) . . m Proteomics:Gaining Momentum Meeting on 2010-01-15
- 15:38, 26 February 2010 (diff | hist) . . (+25) . . m BioAssist Scientific Programmers
- 15:38, 26 February 2010 (diff | hist) . . (+58) . . m Proteomics
- 15:34, 26 February 2010 (diff | hist) . . (+31) . . m Programmers Meetings
- 15:29, 26 February 2010 (diff | hist) . . (+64) . . m Proteomics
- 13:22, 26 February 2010 (diff | hist) . . (+627) . . m Proteomics (added 'How to contribute' section)
- 12:57, 26 February 2010 (diff | hist) . . (+130) . . m BioAssist Scientific Programmers (added links)
- 12:34, 26 February 2010 (diff | hist) . . (+193) . . m Proteomics (added two slides)
- 12:29, 26 February 2010 (diff | hist) . . (+138) . . File:Proteomics platform slides.ppt (current)
- 12:28, 26 February 2010 (diff | hist) . . (+63) . . File:Proteomics workpackages.jpg (current)
- 12:28, 26 February 2010 (diff | hist) . . (+62) . . File:NBPP role.jpg (current)
- 12:27, 26 February 2010 (diff | hist) . . (0) . . N File:Proteomics platform slides.ppt
- 12:27, 26 February 2010 (diff | hist) . . (+60) . . N File:NBPP role.jpg (The role in NBPP among other institutes / initiative groups.)
- 12:24, 26 February 2010 (diff | hist) . . (+44) . . N File:Proteomics workpackages.jpg (The contribution of groups into workpackages)
- 00:54, 26 February 2010 (diff | hist) . . (-3) . . m Proteomics:Data exchange format
- 21:26, 25 February 2010 (diff | hist) . . (+2) . . m Peregrine Indexing
- 21:25, 25 February 2010 (diff | hist) . . (+4,779) . . N Peregrine Indexing (New page: === Hash-based approach to text indexing === == Indexing the ontology == The first step Peregrine does during the startup is indexing the ontology. It is done by iterating through all on...)
- 17:03, 25 February 2010 (diff | hist) . . (+226) . . m Peregrine Architecture Specification
- 15:37, 25 February 2010 (diff | hist) . . (+12) . . m Proteomics:Programmers Meeting on 2010-02-24
- 15:37, 25 February 2010 (diff | hist) . . (+12) . . m Proteomics:Programmers Meeting on 2010-01-26
- 15:36, 25 February 2010 (diff | hist) . . (+13) . . m Proteomics:Introduction Meeting on 2009-12-08
- 15:36, 25 February 2010 (diff | hist) . . (+17) . . Proteomics:Gaining Momentum Meeting on 2010-01-15
- 15:22, 25 February 2010 (diff | hist) . . (+12) . . Proteomics platform tools
- 15:21, 25 February 2010 (diff | hist) . . (+13) . . m Proteomics data formats
- 15:21, 25 February 2010 (diff | hist) . . (+8) . . m Proteomics (Mass Spectrometry) Library (current)
- 15:20, 25 February 2010 (diff | hist) . . (+15) . . m Peregrine Disambiguation
- 16:02, 24 February 2010 (diff | hist) . . (+31) . . m Proteomics (added DAF)
- 15:59, 24 February 2010 (diff | hist) . . (+34) . . Data Analysis Framework
- 23:01, 21 February 2010 (diff | hist) . . (+241) . . m Proteomics:Programmers Meeting on 2010-01-26
- 22:21, 21 February 2010 (diff | hist) . . (+109) . . m TavernaGrid (added taverna workflow processing)
- 22:18, 21 February 2010 (diff | hist) . . (+231) . . File:TavernaGrid workflow processing.png (current)
- 22:15, 21 February 2010 (diff | hist) . . (0) . . N File:TavernaGrid workflow processing.odg (current)
- 22:15, 21 February 2010 (diff | hist) . . (0) . . N File:TavernaGrid workflow processing.png
- 17:38, 21 February 2010 (diff | hist) . . (+69) . . m Peregrine Usage (reflected disambiguators refactoring)
- 00:25, 21 February 2010 (diff | hist) . . (0) . . NBIC (Redirecting to Netherlands Bioinformatics Centre) (current)
- 23:46, 19 February 2010 (diff | hist) . . (+56) . . m Proteomics:Programmers Meeting on 2010-02-24
- 23:40, 19 February 2010 (diff | hist) . . (+1,249) . . N Proteomics:Programmers Meeting on 2010-02-24 (New page: == Location and date == [http://maps.google.com/maps?f=q&source=s_q&hl=ru&geocode=&q=Antonius+Deusinglaan+1,+9713+AV+Groningen&sll=37.0625,-95.677068&sspn=36.315864,79.013672&ie=UTF8&hq=&...)
- 23:35, 19 February 2010 (diff | hist) . . (+59) . . m Proteomics
- 23:23, 19 February 2010 (diff | hist) . . (+136) . . m Proteomics
- 19:35, 19 February 2010 (diff | hist) . . (+567) . . m Peregrine Releases (added changes in disambiguation API)
- 22:30, 18 February 2010 (diff | hist) . . (0) . . File:Peregrine API Diagram.png (uploaded a new version of "Image:Peregrine API Diagram.png") (current)
- 15:06, 17 February 2010 (diff | hist) . . (+105) . . m Proteomics platform tools
- 21:58, 16 February 2010 (diff | hist) . . (+19) . . m Proteomics (updated users)
- 21:33, 16 February 2010 (diff | hist) . . (0) . . m Proteomics:Programmers Meeting on 2010-01-26 (Proteomics:Meeting on 2010-01-26 moved to Proteomics:Programmers Meeting on 2010-01-26)
- 21:33, 16 February 2010 (diff | hist) . . (+58) . . N Proteomics:Meeting on 2010-01-26 (Proteomics:Meeting on 2010-01-26 moved to Proteomics:Programmers Meeting on 2010-01-26) (current)
- 21:31, 16 February 2010 (diff | hist) . . (0) . . m Proteomics:Introduction Meeting on 2009-12-08 (Proteomics:Meeting on 2009-12-08 moved to Proteomics:Introduction Meeting on 2009-12-08)
- 21:31, 16 February 2010 (diff | hist) . . (+59) . . N Proteomics:Meeting on 2009-12-08 (Proteomics:Meeting on 2009-12-08 moved to Proteomics:Introduction Meeting on 2009-12-08) (current)
- 21:31, 16 February 2010 (diff | hist) . . (0) . . m Proteomics:Gaining Momentum Meeting on 2010-01-15 (Proteomics:Meeting on 2010-01-15 moved to Proteomics:Gaining Momentum Meeting on 2010-01-15)
- 21:31, 16 February 2010 (diff | hist) . . (+63) . . N Proteomics:Meeting on 2010-01-15 (Proteomics:Meeting on 2010-01-15 moved to Proteomics:Gaining Momentum Meeting on 2010-01-15) (current)
- 15:07, 15 February 2010 (diff | hist) . . (-37) . . m Peregrine Releases
- 23:06, 13 February 2010 (diff | hist) . . (0) . . m User:Dmitry Katsubo
- 11:59, 12 February 2010 (diff | hist) . . (+391) . . Peregrine Releases (planned v0.3)
- 01:26, 12 February 2010 (diff | hist) . . (0) . . m Peregrine Releases
- 21:31, 11 February 2010 (diff | hist) . . (+495) . . m Peregrine Releases (updated 0.2 release information)
- 20:00, 11 February 2010 (diff | hist) . . (+430) . . m Peregrine Disambiguation (added diagram)
- 19:59, 11 February 2010 (diff | hist) . . (0) . . N File:Peregrine Disambiguation Process Sequence Diagram.png (current)
- 19:56, 11 February 2010 (diff | hist) . . (+435) . . m Peregrine Development
- 19:46, 11 February 2010 (diff | hist) . . (0) . . File:Peregrine API Diagram.png (uploaded a new version of "Image:Peregrine API Diagram.png")
- 16:31, 11 February 2010 (diff | hist) . . (+3,009) . . N Peregrine Disambiguation (New page: == Disambiguation process == After the results are retrieved from indexing engine, the special procedure takes place to assure, that results are accurate for in the given context. For exa...)
- 14:26, 11 February 2010 (diff | hist) . . (+8,417) . . Peregrine Usage (added sample configurations)
- 19:23, 10 February 2010 (diff | hist) . . (+21) . . m Peregrine Architecture Specification
- 14:49, 9 February 2010 (diff | hist) . . (+235) . . m Category:Proteomics
- 22:54, 8 February 2010 (diff | hist) . . (0) . . File:Peregrine API Diagram.png (uploaded a new version of "Image:Peregrine API Diagram.png")
- 15:32, 4 February 2010 (diff | hist) . . (+112) . . m Groningen University
- 13:03, 4 February 2010 (diff | hist) . . (+34) . . N User:Dmitry.katsubo (Redirecting to User:Dmitry Katsubo) (current)
- 13:02, 4 February 2010 (diff | hist) . . (+48) . . Data Analysis Framework
- 13:01, 4 February 2010 (diff | hist) . . (-75) . . m User:George (put the brackets around abbreviations) (current)
- 22:27, 3 February 2010 (diff | hist) . . (+683) . . m Peregrine Releases (coppied SVN comments)
- 16:53, 2 February 2010 (diff | hist) . . (+81) . . m Netherlands Proteomics Centre
- 15:10, 2 February 2010 (diff | hist) . . (-57) . . m Proteomics (Madalina and Jeroen do not work for UU anymore)
- 14:44, 2 February 2010 (diff | hist) . . (+310) . . m Proteomics (added few links)
- 11:43, 2 February 2010 (diff | hist) . . (+1,568) . . Category:Proteomics
- 11:34, 2 February 2010 (diff | hist) . . (+34) . . N Task force (Redirecting to Category:Task Force) (current)
- 18:26, 1 February 2010 (diff | hist) . . (-98) . . m Proteomics platform tools
- 18:24, 1 February 2010 (diff | hist) . . (+43) . . N Proteomics software (Redirecting to Category:Proteomics:Software) (current)
- 18:19, 1 February 2010 (diff | hist) . . (+8) . . m Software for mass accuracy improvement and peptide mass recalibration
- 18:19, 1 February 2010 (diff | hist) . . (+8) . . m Software for proteomics search results processing
- 18:19, 1 February 2010 (diff | hist) . . (+22) . . m Software for peptide identification
- 18:18, 1 February 2010 (diff | hist) . . (+9) . . m Software for processing raw proteomics data
- 18:16, 1 February 2010 (diff | hist) . . (-134) . . m Proteomics (added few links)
- 18:15, 1 February 2010 (diff | hist) . . (+24) . . N Proteomics pipelines (New page: Category:Proteomics)
- 18:15, 1 February 2010 (diff | hist) . . (+12) . . Proteomics software frameworks
- 18:14, 1 February 2010 (diff | hist) . . (0) . . m Proteomics software frameworks (Proteomics software frameworks and pipelines moved to Proteomics software frameworks)
- 18:14, 1 February 2010 (diff | hist) . . (+44) . . N Proteomics software frameworks and pipelines (Proteomics software frameworks and pipelines moved to Proteomics software frameworks) (current)
- 18:01, 1 February 2010 (diff | hist) . . (+266) . . m Category:Proteomics (added links)
- 17:53, 1 February 2010 (diff | hist) . . (-19) . . Proteomics Portal (Redirecting to Category:Proteomics)
- 17:49, 1 February 2010 (diff | hist) . . (0) . . m Proteomics platform tools (Platform tool moved to Proteomics platform tools)
- 17:49, 1 February 2010 (diff | hist) . . (+39) . . N Platform tool (Platform tool moved to Proteomics platform tools) (current)
- 17:40, 1 February 2010 (diff | hist) . . (+32) . . m User:Dmitry Katsubo
- 16:32, 1 February 2010 (diff | hist) . . (+81) . . m EU-ADR (added web site)
- 15:02, 1 February 2010 (diff | hist) . . (+4) . . m BioRange
- 15:01, 1 February 2010 (diff | hist) . . (+1,031) . . N BioRange (New page: The NBIC research program BioRange focuses bioinformatics research on problem areas in the life sciences as defined mainly by the NGI clusters. BioRange, formally started i...)
- 14:56, 1 February 2010 (diff | hist) . . (+701) . . Netherlands Proteomics Centre (added description)
- 14:55, 1 February 2010 (diff | hist) . . (+501) . . Netherlands Genomics Initiative (added description)
- 14:42, 1 February 2010 (diff | hist) . . (+12,925) . . Proteomics (added workpackages)
- 14:28, 1 February 2010 (diff | hist) . . (+40) . . User:Dmitry Katsubo
- 14:06, 1 February 2010 (diff | hist) . . (-20) . . BioAssist Main Page
- 14:04, 1 February 2010 (diff | hist) . . (+46) . . Proteomics platform (Redirecting to Netherlands Bioinformatics for Proteomics Platform)
- 14:03, 1 February 2010 (diff | hist) . . (+18) . . N Proteomics platform (Redirecting to NBPP)
- 13:55, 1 February 2010 (diff | hist) . . (0) . . m Software for peptide identification (Software for Peptide identification moved to Software for peptide identification)
- 13:55, 1 February 2010 (diff | hist) . . (+49) . . N Software for Peptide identification (Software for Peptide identification moved to Software for peptide identification) (current)
- 13:54, 1 February 2010 (diff | hist) . . (+37) . . N Proteomics data standards (Redirecting to Proteomics data formats) (current)
- 13:40, 1 February 2010 (diff | hist) . . (+30) . . N SURFnet (New page: # Site: http://www.surfnet.nl/)
- 13:36, 1 February 2010 (diff | hist) . . (+45) . . N NGI (Redirecting to Netherlands Genomics Initiative) (current)
- 13:36, 1 February 2010 (diff | hist) . . (+122) . . N Netherlands Genomics Initiative (New page: * Site: http://www.genomics.nl/ * LinkedIn profile: http://www.linkedin.com/companies/netherlands-genomics-initiative-ngi-)
- 13:31, 1 February 2010 (diff | hist) . . (+37) . . N DLSG (Redirecting to Dutch Life Science GRID) (current)
- 13:30, 1 February 2010 (diff | hist) . . (+59) . . N Dutch Life Science GRID (New page: Site: https://grid.sara.nl/wiki/index.php/Life_Science_Grid)
- 13:27, 1 February 2010 (diff | hist) . . (-97) . . Proteomics:Gaining Momentum Meeting on 2010-01-15
- 13:15, 1 February 2010 (diff | hist) . . (+43) . . N NPC (Redirecting to Netherlands Proteomics Centre) (current)
- 13:15, 1 February 2010 (diff | hist) . . (+48) . . N Netherlands Proteomics Centre (New page: Site: http://www.netherlandsproteomicscentre.nl/)
- 13:12, 1 February 2010 (diff | hist) . . (+64) . . N NBPP (Redirecting to Netherlands Bioinformatics for Proteomics Platform)
- 13:11, 1 February 2010 (diff | hist) . . (0) . . m Proteomics (Proteomics data management and analysis moved to Netherlands Bioinformatics for Proteomics Platform: Renamed, as this is the title of the platform in original proposal.)
- 13:11, 1 February 2010 (diff | hist) . . (+64) . . N Proteomics data management and analysis (Proteomics data management and analysis moved to Netherlands Bioinformatics for Proteomics Platform: Renamed, as this is the title of the platform in original proposal.)
- 13:08, 1 February 2010 (diff | hist) . . (0) . . m Wageningen University and Research Centre (Wageningen University and Research Center moved to Wageningen University and Research Centre)
- 13:08, 1 February 2010 (diff | hist) . . (+55) . . N Wageningen University and Research Center (Wageningen University and Research Center moved to Wageningen University and Research Centre) (current)
- 13:08, 1 February 2010 (diff | hist) . . (0) . . m Netherlands Bioinformatics Centre (Netherlands Bioinformatics Center moved to Netherlands Bioinformatics Centre)
- 13:08, 1 February 2010 (diff | hist) . . (+47) . . N Netherlands Bioinformatics Center (Netherlands Bioinformatics Center moved to Netherlands Bioinformatics Centre) (current)
- 17:29, 30 January 2010 (diff | hist) . . (+22) . . m File:Workflow steps PeterHorvatovich 080115.ppt (current)
- 17:27, 30 January 2010 (diff | hist) . . (+91) . . m User:Bvanbreukelen (current)
- 17:27, 30 January 2010 (diff | hist) . . (-15) . . m StatQuant
- 17:26, 30 January 2010 (diff | hist) . . (-7) . . m LysNDeNovo
- 17:26, 30 January 2010 (diff | hist) . . (+23) . . m Proteomics:Programmers Meeting on 2010-01-26
- 17:23, 30 January 2010 (diff | hist) . . (-12) . . m Proteomics (Mass Spectrometry) Library
- 22:46, 28 January 2010 (diff | hist) . . (+26) . . m Proteomics platform tools (added category)
- 22:45, 28 January 2010 (diff | hist) . . (+44) . . m Proteomics platform tools (uploaded XLS template)
- 22:42, 28 January 2010 (diff | hist) . . (0) . . N File:Proteomics tool workflow template.xls (current)
- 16:27, 28 January 2010 (diff | hist) . . (+2,189) . . m Service Oriented Architecture (added links)
- 16:39, 27 January 2010 (diff | hist) . . (+30) . . m Proteomics:Programmers Meeting on 2010-01-26
- 16:37, 27 January 2010 (diff | hist) . . (+1,214) . . Proteomics:Programmers Meeting on 2010-01-26 (added minute notes)
- 15:37, 27 January 2010 (diff | hist) . . (+14) . . DAF (Redirecting to Data Analysis Framework) (current)
- 12:25, 27 January 2010 (diff | hist) . . (-7) . . m Proteomics:Gaining Momentum Meeting on 2010-01-15
- 01:04, 27 January 2010 (diff | hist) . . (+3,228) . . N Proteomics:Programmers Meeting on 2010-01-26 (New page: == Location and time == 11:00 – 18:00 == Presenters == * Peter Horvatovich, RUG * George Byelas * [[User:Dmitry Katsubo|Dmitry Katsubo...)
- 18:35, 25 January 2010 (diff | hist) . . (+139) . . m Proteomics:Gaining Momentum Meeting on 2010-01-15 (added user links)
- 15:59, 25 January 2010 (diff | hist) . . (+1,769) . . Proteomics data formats
- 15:35, 25 January 2010 (diff | hist) . . (+4,420) . . Proteomics:Gaining Momentum Meeting on 2010-01-15 (added minute notes)
- 15:32, 25 January 2010 (diff | hist) . . (-15) . . m NGS Member Overview
- 15:30, 25 January 2010 (diff | hist) . . (+835) . . N User:Bvanbreukelen (New page: == Information about Bas van Breukelen == right === Contact information === '''Mobile phone:''' +31(0)302539761 '''E-mail:''' [mailto:b.vanbreukelen@uu....)
- 15:23, 25 January 2010 (diff | hist) . . (0) . . N File:Bas van Breukelen.jpg (current)
- 14:46, 25 January 2010 (diff | hist) . . (-46) . . m User:Dmitry Katsubo
- 14:45, 25 January 2010 (diff | hist) . . (+47) . . N NBIC (Redirecting to Netherlands Bioinformatics Center)
- 14:45, 25 January 2010 (diff | hist) . . (+61) . . N Netherlands Bioinformatics Centre (New page: == Netherlands Bioinformatics Center == * http://www.nbic.nl)
- 14:43, 25 January 2010 (diff | hist) . . (+31) . . m NGS Meeting on 18-12-2009
- 14:40, 25 January 2010 (diff | hist) . . (+34) . . N RUG (Redirecting to Groningen University) (current)
- 14:40, 25 January 2010 (diff | hist) . . (+70) . . N Groningen University (New page: == Groningen University == * http://www.rug.nl/ * http://www.umcg.nl/)
- 14:32, 25 January 2010 (diff | hist) . . (+53) . . N MzML (Redirecting to Proteomics data formats#Peak list level) (current)
- 14:32, 25 January 2010 (diff | hist) . . (+53) . . N PepXML (Redirecting to Proteomics data formats#Peak list level) (current)
- 14:27, 25 January 2010 (diff | hist) . . (+55) . . N WUR (Redirecting to Wageningen University and Research Center)
- 14:26, 25 January 2010 (diff | hist) . . (+156) . . N Wageningen University and Research Centre (New page: == Wageningen University and Research Center == * http://www.wageningenuniversity.nl/ * [http://www.bioinformatics.nl/ Wageningen Bioinformatics Webportal])
- 14:15, 25 January 2010 (diff | hist) . . (+12) . . m DbNPCleanTranscriptomicsDatabase
- 14:14, 25 January 2010 (diff | hist) . . (+36) . . m Sara builds Life Science Grid (current)
- 14:09, 25 January 2010 (diff | hist) . . (+32) . . Sara bouwt Life Science Grid
- 14:06, 25 January 2010 (diff | hist) . . (+36) . . N EMC (Redirecting to Erasmus Medical Centre) (current)
- 14:00, 25 January 2010 (diff | hist) . . (+22) . . N Molgenis (Redirecting to MOLGENIS) (current)
- 13:59, 25 January 2010 (diff | hist) . . (+32) . . N UU (Redirecting to Utrecht University) (current)
- 13:59, 25 January 2010 (diff | hist) . . (+158) . . N Utrecht University (New page: == Utrecht University == '''Site:''' http://www.uu.nl/ === Departments === * [http://bioms.chem.uu.nl/ Biomolecular Mass Spectrometry and Proteomics Group])
- 13:56, 25 January 2010 (diff | hist) . . (+1) . . User:Rob Hooft
- 13:56, 25 January 2010 (diff | hist) . . (+4) . . User:Jdnavarro
- 13:55, 25 January 2010 (diff | hist) . . (+6) . . Proteomics:Introduction Meeting on 2009-12-08
- 13:54, 25 January 2010 (diff | hist) . . (+4) . . User:Alex.g (current)
- 13:54, 25 January 2010 (diff | hist) . . (+4) . . User:Toorn101
- 00:40, 25 January 2010 (diff | hist) . . (+382) . . EU-ADR
- 01:43, 24 January 2010 (diff | hist) . . (+674) . . Peregrine Releases
- 01:16, 24 January 2010 (diff | hist) . . (+336) . . EU-ADR
- 01:14, 24 January 2010 (diff | hist) . . (0) . . N File:EUADR XSD Schema.png (current)
- 00:47, 24 January 2010 (diff | hist) . . (-18) . . BioSemantics
- 00:46, 24 January 2010 (diff | hist) . . (+36) . . N Erasmus MC (Redirecting to Erasmus Medical Centre) (current)
- 20:10, 23 January 2010 (diff | hist) . . (+239) . . User:Dmitry Katsubo
- 20:08, 23 January 2010 (diff | hist) . . (+44) . . N Erasmus Medical Centre (New page: [http://erasmusmc.nl Erasmus Medical Centre])
- 14:32, 22 January 2010 (diff | hist) . . (+854) . . Presentation OSS licenses
- 17:29, 21 January 2010 (diff | hist) . . (0) . . File:Euadr SQL Schema.sql (uploaded a new version of "Image:Euadr SQL Schema.sql") (current)
- 17:28, 21 January 2010 (diff | hist) . . (0) . . File:Euadr RDF Schema.xml (uploaded a new version of "Image:Euadr RDF Schema.xml") (current)
- 17:28, 21 January 2010 (diff | hist) . . (+672) . . EU-ADR (updated interface)
- 18:37, 20 January 2010 (diff | hist) . . (-1) . . m Proteomics:Introduction Meeting on 2009-12-08
- 22:52, 19 January 2010 (diff | hist) . . (+112) . . m Proteomics:Gaining Momentum Meeting on 2010-01-15 (added some presentations)
- 22:52, 19 January 2010 (diff | hist) . . (+34) . . Agenda Scientific Programmers Meeting 2009/12/18
- 21:09, 19 January 2010 (diff | hist) . . (+42) . . m User:Dmitry Katsubo
- 19:22, 18 January 2010 (diff | hist) . . (+277) . . m Talk:Gforge (→Probable Candidates)
- 18:40, 18 January 2010 (diff | hist) . . (+53) . . User:Dmitry Katsubo (added MyExperiment profile)
- 18:37, 18 January 2010 (diff | hist) . . (-12) . . Proteomics:Gaining Momentum Meeting on 2010-01-15 (added existing users)
- 18:18, 18 January 2010 (diff | hist) . . (+1,895) . . N Proteomics:Gaining Momentum Meeting on 2010-01-15 (New page: == Location == Biomolecular Mass Spectrometry and Proteomics Group, [http://maps.google.com/maps?f=q&source=s_q&hl=ru&geocode=&q=Padualaan+8,+3584CA+Utrecht,+NL&sll=52.085427,5.168488&ssp...)
- 18:06, 18 January 2010 (diff | hist) . . (+130) . . User:Dmitry Katsubo
- 17:02, 18 January 2010 (diff | hist) . . (+132) . . 2010 outing
- 16:53, 18 January 2010 (diff | hist) . . (+365) . . 2010 outing (added more ideas)
- 16:45, 6 January 2010 (diff | hist) . . (+6) . . m User talk:Mroos
- 13:05, 5 January 2010 (diff | hist) . . (-2) . . User:Dmitry Katsubo
- 12:51, 17 December 2009 (diff | hist) . . (+85) . . Peregrine
- 12:46, 17 December 2009 (diff | hist) . . (+1,079) . . Peregrine Releases
- 01:39, 17 December 2009 (diff | hist) . . (+478) . . Peregrine Usage (added maven repository)
- 01:39, 17 December 2009 (diff | hist) . . (+555) . . N Peregrine Releases (New page: == Peregrine Releases == === v1.0 === SCM: [https://gforge.nbic.nl/svn/data-mining/tags/data-mining-0.1/ gForce SVN] Maven repo: [http://ws1.grid.sara.nl:21501/artifactory/libs-releases...)
- 17:40, 4 December 2009 (diff | hist) . . (+67) . . m Peregrine (added xsd types)
- 17:37, 4 December 2009 (diff | hist) . . (+51) . . N File:Peregrine XSD Types.zip (The XSD types used in Peregrine API and WebService.) (current)
- 16:29, 3 December 2009 (diff | hist) . . (+103) . . m Spring Framework Workshop 2009-11-02 (added link to trainings)
- 16:13, 3 December 2009 (diff | hist) . . (+807) . . Peregrine Architecture Specification (added implementation comparison)
- 14:01, 3 December 2009 (diff | hist) . . (-2) . . m User:Dmitry Katsubo (fixed email)
- 18:28, 1 December 2009 (diff | hist) . . (+860) . . N Proteomics:Introduction Meeting on 2009-12-08 (New page: == Location == [http://maps.google.com/maps?f=q&source=s_q&hl=en&geocode=&q=padualaan+8,+utrecht&sll=51.983188,4.173825&sspn=0.010731,0.020492&ie=UTF8&hq=&hnear=Padualaan+8,+3584+Utrecht,...)
- 21:23, 30 November 2009 (diff | hist) . . (+71) . . m Peregrine
- 21:22, 30 November 2009 (diff | hist) . . (+1,264) . . N Peregrine DB Schema (New page: Peregrine DB Ontology is based on the following schema: <pre> drop table if exists semantic_type; drop table if exists db_link; drop table if exists term; drop table if exists concept; c...)
- 13:50, 27 November 2009 (diff | hist) . . (0) . . m SWAT4LS Workshop 2009-11-20 (SWAT4LS Conference 2009-11-20 moved to SWAT4LS Workshop 2009-11-20)
- 13:50, 27 November 2009 (diff | hist) . . (+41) . . N SWAT4LS Conference 2009-11-20 (SWAT4LS Conference 2009-11-20 moved to SWAT4LS Workshop 2009-11-20) (current)
- 13:45, 27 November 2009 (diff | hist) . . (+29) . . m SWAT4LS Workshop 2009-11-20
- 13:45, 27 November 2009 (diff | hist) . . (+1,084) . . N SWAT4LS Workshop 2009-11-20 (New page: The [Semantic Web Applications and Tools for Life Sciences] workshop was held on 20 Nov 2009 in Science Park, Amsterdam. Among numerous examples of application of Semantic Web principles ...)
- 13:33, 27 November 2009 (diff | hist) . . (+88) . . N File:SWAT4LS Summary 2009-11-20.tif (This file contains (multi-paged TIF): - Program - List of participants - List of posters) (current)
- 19:31, 21 November 2009 (diff | hist) . . (+173) . . m Peregrine
- 19:30, 18 November 2009 (diff | hist) . . (+60) . . Peregrine Architecture Specification (updated diagrams)
- 19:29, 18 November 2009 (diff | hist) . . (0) . . N File:Peregrine Add Remove Concept Sequence Diagram.png (current)
- 19:27, 18 November 2009 (diff | hist) . . (0) . . N File:Peregrine Packaging Diagram.png (current)
- 19:27, 18 November 2009 (diff | hist) . . (0) . . N File:Peregrine API Diagram.png
- 14:09, 18 November 2009 (diff | hist) . . (+681) . . Suggestions for Programmers Meeting Topics
- 15:29, 9 November 2009 (diff | hist) . . (+96) . . m ErasmusMC ontology file format
- 14:22, 9 November 2009 (diff | hist) . . (+1,125) . . ErasmusMC ontology file format (Added minor details. Reformatted.)
- 15:03, 5 November 2009 (diff | hist) . . (+333) . . m EU-ADR (added taverna flow)
- 00:40, 5 November 2009 (diff | hist) . . (0) . . N File:EU-ADR Taverna Workflow Run Sample.png (current)
- 00:37, 5 November 2009 (diff | hist) . . (0) . . N File:EU-ADR Taverna Workflow.t2flow (current)
- 17:21, 4 November 2009 (diff | hist) . . (+273) . . m Spring Framework Workshop 2009-11-02 (minor addons)
- 20:10, 3 November 2009 (diff | hist) . . (+2,775) . . N Spring Framework Workshop 2009-11-02 (initial version)
- 14:10, 30 October 2009 (diff | hist) . . (+465) . . m EU-ADR (added protect technologies notes)
- 19:29, 29 October 2009 (diff | hist) . . (+954) . . m EU-ADR (updated API)
- 19:24, 29 October 2009 (diff | hist) . . (0) . . File:Euadr RDF Schema.xml (uploaded a new version of "Image:Euadr RDF Schema.xml")
- 19:23, 29 October 2009 (diff | hist) . . (0) . . File:Euadr SQL Schema.sql (uploaded a new version of "Image:Euadr SQL Schema.sql")
- 00:20, 29 October 2009 (diff | hist) . . (+98) . . m EU-ADR
- 23:43, 26 October 2009 (diff | hist) . . (+893) . . EU-ADR (added architectural notes)
- 23:42, 26 October 2009 (diff | hist) . . (0) . . N File:Euadr SQL Schema.sql
- 23:40, 26 October 2009 (diff | hist) . . (0) . . N File:Euadr RDF Schema.xml
- 23:17, 26 October 2009 (diff | hist) . . (0) . . File:Euadr Storage Architecture.odg (uploaded a new version of "Image:Euadr Storage Architecture.odg") (current)
- 23:17, 26 October 2009 (diff | hist) . . (0) . . File:Euadr Storage Architecture.gif (uploaded a new version of "Image:Euadr Storage Architecture.gif") (current)
- 23:16, 26 October 2009 (diff | hist) . . (0) . . File:Euadr Storage Architecture.gif (uploaded a new version of "Image:Euadr Storage Architecture.gif")
- 22:58, 26 October 2009 (diff | hist) . . (0) . . N File:Euadr Storage Architecture.gif
- 22:55, 26 October 2009 (diff | hist) . . (0) . . N File:Euadr Storage Architecture.odg
- 19:35, 26 October 2009 (diff | hist) . . (+4,118) . . EU-ADR (initial version)
- 14:02, 24 October 2009 (diff | hist) . . (-24) . . m Peregrine (removed category)
- 14:01, 24 October 2009 (diff | hist) . . (+134) . . N EU-ADR (initial version)
- 13:57, 24 October 2009 (diff | hist) . . (+18) . . User:Dmitry Katsubo (added reference to EU-ADR project)
- 13:53, 24 October 2009 (diff | hist) . . (-3,452) . . Sesame (removed information non-relative for the evaluation)
- 13:04, 22 October 2009 (diff | hist) . . (+1,435) . . Sesame (added more RDBMS store implementation details)
- 23:24, 19 October 2009 (diff | hist) . . (+4,093) . . N Concept Wiki Store (moved from internal wiki)
- 23:24, 19 October 2009 (diff | hist) . . (+4,999) . . N Sesame (moved from internal wiki)
- 17:35, 19 October 2009 (diff | hist) . . (+1,131) . . N Category:Triple Store (moved from internal wiki)
- 10:48, 8 October 2009 (diff | hist) . . (+397) . . Peregrine Development (added info how to change SVN credentials)
- 16:05, 5 October 2009 (diff | hist) . . (+29) . . m User:Dmitry Katsubo
- 00:25, 5 October 2009 (diff | hist) . . (+36) . . User:Dmitry Katsubo (added image)
- 00:21, 5 October 2009 (diff | hist) . . (0) . . N File:Dmitry Katsubo.jpg (current)
- 15:19, 3 October 2009 (diff | hist) . . (+313) . . N Peregrine Usage (initial version)
- 14:38, 3 October 2009 (diff | hist) . . (+1,539) . . N User:Dmitry Katsubo (initial version)
- 16:14, 2 October 2009 (diff | hist) . . (+450) . . N Peregrine Architecture Specification (New page: == Peregrine API == The collaboration between interfaces and some of implementation packages are displayed on this diagram: Image:Peregrine_API_Diagram.jpg Implementation details: ...)
- 17:42, 1 October 2009 (diff | hist) . . (0) . . N File:Peregrine Packaging Diagram.jpg (current)
- 17:42, 1 October 2009 (diff | hist) . . (0) . . N File:Peregrine API Diagram.jpg (current)
- 16:34, 1 October 2009 (diff | hist) . . (+1,602) . . N Peregrine Development (initial version)
- 16:28, 1 October 2009 (diff | hist) . . (+45) . . N File:Maven Settings.xml (Maven settings for Nexus Repository on bios5.) (current)
- 16:25, 1 October 2009 (diff | hist) . . (+23) . . N File:Maven Environment.gif (Maven environment setup) (current)
- 15:48, 1 October 2009 (diff | hist) . . (+47) . . N File:Eclipse import projects.png (Shows, how to import new projects into Eclipse.) (current)
- 15:38, 1 October 2009 (diff | hist) . . (+43) . . N File:Eclipse switch to workingsets.png (Shows how to switch Eclipse to working sets) (current)
- 14:51, 1 October 2009 (diff | hist) . . (+445) . . N Peregrine (New page: = Description = TODO: Few words about Peregrine. = User documentation = * Read Peregrine Usage about possible flows how to use Peregrine. = Developer's documentation = * Read [[...)
