Difference between revisions of "Lecture History"
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Revision as of 17:57, 7 November 2012
This is a collection of BioAssist lectures for which presentation materials are available on line.
See BioAssist:Meetings for the current meeting schedule.
| Date + Occasion | Who | What |
|---|---|---|
| 12 October 2012 | Freek de Bruijn (NBIC) | Rosalind and Coursera - slides (ppt) |
| 17 August 2012 | Freek de Bruijn (NBIC) | Code Reviews: why and how - slides (ppt) |
| 17 August 2012 | David van Enckevort (NBIC) | Code Review D2RQ - slides (pdf) |
| 25 May 2012 | Rob Hooft (NBIC) & Merlijn van Rijswijk (NMC) | Copyright and Licenses - slides and speaker notes (pdf) - video |
| 20 April 2012 | Morris Swertz | LIMS in Biobanking - video |
| 20 April 2012 | Henk van den Toorn (UU) | LIMS in Proteomics - video |
| 20 April 2012 | Zuotian Tatum (LUMC) | LIMS in NGS - video |
| 20 April 2012 | Jildau Bouwman (TNO) | LIMS in Metabolomics - video |
| 23 March 2012 | Pieter Lukasse (WUR) | Proteomics work in Wageningen - video |
| 23 March 2012 | Paul de Bakker | The Biology Behind BioBanking - video |
| 23 March 2012 | Niek Bosch (SARA) | Life Science Grid Portal - slides (pdf) - video |
| 23 March 2012 | Jeroen Laros (LUMC) | Running workflows using "make" - video |
| 17 February 2012 | Willem van Engen (NIKHEF) | R portal - slides (pdf) - more information - video |
| 17 February 2012 | Leon Mei and David van Enckevort (NBIC) | Workshop: Peregrine - video |
| 17 February 2012 | Mattias de Hollander (NIOO) | Running Galaxy in the SARA HPC Cloud - video |
| 13 January 2012 | Stefan Verhoeven (NLeSC) | ExtJS - video |
| 13 January 2012 | David van Enckevort (NBIC) and Reinout van Schouwen (LUMC) | Netbeans - presentation video |
| 9 December 2011 | Friso van Vollenhoven (Xebia) | Hadoop Workshop - slides (pdf) - video part 1 - video part 2 |
| 9 December 2011 | Freek de Bruijn (NBIC) | Knowledge on demand - slides (ppt) |
| 14 October 2011 | Martin Pinzger (TUD) | Architectural Viewpoints - pdf-slides - video |
| 16 September 2011 | Michael Moorhouse | Data storage & organisation in Screening Units - video |
| 16 September 2011 | Cristian Cirstea | Grid data access using a WebDAV Cache - video |
| 16 September 2011 | Pieter van Beek (SARA) | Persistent identifiers- video |
| 16 September 2011 | Zuotian Tatum (LUMC) | Galaxy tool wrapper generator (CLI-mate) - (software) - slides (pdf) - video |
| 12 August 2011 | Jan Velterop (AQnowledge) | Open data for publishers - video |
| 12 August 2011 | Bart van Leeuwen (netage / Amsterdam fire department) | Linked 'open' data for emergency response services video - slides (pdf) |
| 15 July 2011 | Anne van Kesteren (Opera) | HTML5 - video |
| 20 May 2011 | Rob Hooft (NBIC) | How I learned OOP: The pipeline pattern - prezi |
| 15 April 2011 | Konstantinos Karasavvas (NBIC) | Pipelines and Workflows: Technical Discussion (pdf) |
| 18 March 2011 | Ivo Fokkema (LUMC) | LOVD (pdf) |
| 18 March 2011 | Rutger Brouwer (EMC) | Chip-seq analysis and the pipeline in NBIC Galaxy (pdf) |
| 18 February 2011 | Maarten Kooyman (NBIC BRS) | Using Raphael for the spectral tree project (pdf) |
| 21 January 2011 | Peter-Bram 't Hoen (LUMC) | RNA sequencing: technology and application (pdf) |
| 17 December 2010 | Robert Kraaij (EMC) | Using NGS technologies in population based study (pdf) |
| 17 December 2010 | Harm Nijveen (WUR) | Visualisation for NCSB (pdf) |
| 17 December 2010 | Reinout van Schouwen (LUMC) | Apache Wicket Intro) and Hands-on (pdf) |
| 19 November 2010 | Kees van Bochove (NBIC) | Data interoperability (pdf) |
| 15 October 2010 | Despoina Antonakaki (UMCG) | Ontocat/Lucene (ppt, MS Office) |
| 15 October 2010 | Kai Ye (LUMC) | Pindel Paper on Pubmed |
| 9 July 2010 | Jan Bot (TUD) | CytoscapeRPC tutorial (pdf) |
| 9 July 2010 | Martijn van Iersel (UM) | BridgeDb (ppt, MS Office) |
| 11 June 2010 | Jan Bot (TUD) | 15 million grid jobs (pdf) |
| 11 June 2010 | Morris Swertz (UMCG) | LIMS Systems intro (ppt, MS Office) |
| 11 June 2010 | Kees van Bochove (TNO) | GSCF (pdf) |
| 21 May 2010 | Pieter Neerincx (UU) | Galaxy from developer perspective: Install Modules (pdf) |
| 21 May 2010 | Hailiang Mei (Leon) (NBIC) | Information Retrieval and Apache Solr Use Case (pdf) |
| 16 April 2010 | Kees van Bochove (TNO) | Study Capture Framework (pdf) |
| 9 March 2010 | Tim te Beek (NBIC BRS) | Hudson and Maven (pdf) |
| 19 February 2010 | Paul Groth (VU) | RDF in practice (ppt, MS Office) |
| 15 January 2010 | Jos Koetsier/Jano van Hemert | RAPID demo (pdf) |
| 18 December 2009 | Morris Swertz (UMCG) | MOLGENIS primer (ppt, MS Office) |
| 23 October 2009 | Rob Hooft (NBIC) | Screenshots of the RT Project Management system (pdf) |
| 23 October 2009 | Morris Swertz (UMCG) | Open source data models (ppt, MS Office) |
| 18 September 2009 | Tjeerd Abma (UMCU) | NMC DSP - Metabolomics presentation, Grails/work approach (pdf) |
| 15 May 2009 | Jan Bot (TUD) | Tips & Tricks presentation (pdf) |
| 15 May 2009 | Michael Moorhouse | Programming without programming and Storable example (pdf) |
| 17 April 2009 | Machiel Jansen (SARA) | Taverna Grid and Web Services (ppt, MS Office) |
| 17 April 2009 | Richard Holland (Eagle) | Java API TavernaGrid (odp, OpenOffice) |
| 17 April 2009 | Ingo Wassink | RShell tutorial (pdf) |
| 20 February 2009 | Joost de Groot (WUR) | comparative quantitative LC-MS(2/E) proteomics data analysis (ppt, MS Office) |
| 20 February 2009 | Pieter van Beek (SARA) | About URIs, RDF, and OWL (Gzipped TAR) |
| 23 January 2009 | M. Heuvel | Malick (pdf) |
| 23 January 2009 | Pieter van Beek (SARA) | Packaging and ToPos (pdf) |
| 23 January 2009 | Barbera van Schaik (AMC) | Handling next generation sequence data on the grid (pdf) |
| 14 January 2009 (NPC) | Henk van den Toorn (UU), A.Georgiou | Draft class diagram of data model for NPC library (pdf) |
| 21 November 2008 | Jan Bot (TUD) | Ibidas Overview (pdf) |
| 21 November 2008 | A. Georgiou | Installing the vl-e browser for use on the grid (pdf) |
| 17 October 2008 | Tjeerd Abma (UMCU) | Metabolomics (pdf) |
| 17 October 2008 | Marco Roos (UvA) | A biologist in e-Science? (web, slideshare) |
| 15 September 2008 | Machiel Jansen (SARA) | Engineering workflow elements (pptx, MS Office) |
| 15 September 2008 | A. Georgiou | ProteoPipes (pdf) |
| 15 September 2008 | Morris Swertz (UMCG) | Molgenis (ppt, MS Office) |
