Revision as of 12:27, 4 April 2011

Release notes CytoscapeRPC 1.4

getFontFaces: list all the available fonts.
saveNetwork: save a network to a gml file.
setShowGraphicsDetail: set the detail level.
getCytoscapeVersion: does the same as cytoscapeVersion()
createNetworkFromSelection: create a new network based on the selection in another network.
setLayoutPropertyValues: now also available in a double list variant. Mostly used for R.
[get|set]Center: controls the zoom center.
[get|set]Zoom: controls the zoom level.
createNetwork: can now be used with an additional (boolean) parameter to indicate wether a view should be created.
closeNetworkView & closeAllNetworkViews: methods to close one or all views. Keeps the networks alive.
getEdgeSourceNodes & getEdgeTargetNodes: get the identifiers of the nodes connected to a particular edge.
[get|set] layout property values
fitContent & fitSelectedContent: fit the (selected) content of a network in a view.
getVisualBypassNames: get the names you need to use in the attribute browser to overwrite a particular visual attribute.
setNetworkViewPosition: set the position of a view (the frame) on the Cytoscape desktop.

color parsing
setNode(s)Position(s): added error message when setting the location when there is no view available.

Created a new page containing static names and properties in Cytoscape: CytoscapeProperties

@@ Line 12: / Line 12: @@
 * createNetwork: can now be used with an additional (boolean) parameter to indicate wether a view should be created.
 * closeNetworkView & closeAllNetworkViews: methods to close one or all views. Keeps the networks alive.
-* getEdgeSourceNodes * getEdgeTargetNodes: get the identifiers of the nodes connected to a particular edge.
+* getEdgeSourceNodes & getEdgeTargetNodes: get the identifiers of the nodes connected to a particular edge.
 * [get|set] layout property values
 * fitContent & fitSelectedContent: fit the (selected) content of a network in a view.