Cytoscape SBML import

From BioAssist
Jump to: navigation, search

SBMLReader plugin

Originally this Cytoscape 2.2 plug-in reads all Species and Reactions and puts them into one Cytoscape network regardless of the compartments. It then links the Species to the Reactions using the Reactant and Product lists. Aftwerwards it applies a specific VisualStyle for the SBMLReader plug-in.

Later this plugin has been incorporated into the Cytoscape core release. Meaning that every Cytoscape download now includes this plugin.

This plugin was developed at the biomodeling and bioinformatics group at Eindhoven University of Technology by Ir.

More information:

[1] [2]